If in doubt, I'd recommend deleting and reinstalling the pertaining app. this innocuous tool is well capable of recursively ruining your whole filesystem (and may even keep your system from booting). You shouldn't use chmod unless you have a good understanding of both file modes and ACLs, and more important, of what exactly the problem is, so you can fix it. finally, copying applications between computers with the correct tools might result in invalid "receipt" files (sometimes commercial apps are cryptographically locked to certain hardware ids that way - the receipt will not be valid on the destination machine).a FAT32 formatted USB stick - might ruin file names (capitalization, special characters)
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